I'm experiencing the same or similar problem.
I suspect, but I am not certain, that it is a bug and I'll try to explain my reasons why... but first...
My scenario:
Xcode 11.3 project developing for iOS 13.x and beginning to implement NSPersistentCloudKitContainer.
I have `Transformable` type attributes for two Entities in my data model (for some time now). Incidentally both these attributes are used to store an optional value for Measurement<UnitMass>, which I understand from my reseach, conforms to `Encodable` and is therefore able to "just work" with a Core Data attribute of type `Transformable`. Others have written more on the capabilities of the Foundation `Measurement` class, using more accurate language than me, in this and other forums, so I'll leave this part of my description short.
As I am still in development with my Xcode project, I regularly switch between NSPersistentContainer and NSPersistentCloudKitContainer for testing purposes. This requires regularly resetting the development environment using the CloudKit Dashboard.
To ensure my app loads and runs regardless of which type of persistent container I am currently using, I also enable `NSPersistentHistoryTrackingKey = true`. This ensures that records persisted while my project's "container" is of type NSPersistentContainer are also available while my project's "container" is of type NSPersistentCloudKitContainer.
I recently updated my .xcdatamodel to add new attributes and new relationships to three entities. Two fo these entities contained the aforementioned attributes used to store optional values for Measurement<UnitMass>. Of these two, both contained renamed attributes and implemented the Renaming ID offered by lightweight migration. I reiterate here for clarity that these renamed attributes were not those used to store optional values for Measurement<UnitMass>, but did belong to the same entity.
It seems to me that I was experiencing compounding problems...
Intially my errors were related to your first error code: "One or more models in this application are using transformable properties with transformer names that are either unset, or set to NSKeyedUnarchiveFromDataTransformerName..." etc.
I admit here that I'm not proficient in the use of value transformers or the use of the `Transformable` attribute type... So I hacked away for some time, attempting to apply NSSecureUnarchiveFromData in the Transformer setting in the Attribute Inspector for each of the two attributes that were of type `Transformable`. This didn't seem to have any effect, so I began testing this on other "devices".
To make matters more confusing, I was experiencing different errors depending on what testing platform I was using and when I last updated that app's model - so in fact I was experiencing three different errors - Simulator with iPhone 8 Plus running iOS 13.3, Simulator with iPad Pro 12" 3rd generation running iOS 13.3, on device (iPhone 8 Plus) running iOS 13.3. I eventually deleted the instances of the app on the Simulators, but was extremely reluctant to do so on device due to the large amount of test data installed. Yes I am aware that I could download that and reinstall, but honestly I wanted to try to "fix" this problem.
One of the errors included commentary on the inability of Core Data to rename attributes that are related to CloudKit records.
So my three errors in fact this led me in part to my solution... roll back the data model. I reverted back to an earlier stable data model file that I knew did not cause any errors and ran it succesfully on the previously mentioned devices.
Going forward, I didn't attempt to change/update the attribute names as I had previously... for my next change in the data model I added the "new" attributes, then in the subsequent change in the data model I deleted the "old" attribute. Each time I ran the app on all three devices and received no errors. (Note: I accepted some minor data loss in records where old relationships were nullified on deletion.)
I reiterate here that all this was completed in a development environment in CloudKit.
I regret not recording the exact details of the three different types of errors... but they all began with "One or more models in this application are using transformable properties with transformer names that are either unset, or set to NSKeyedUnarchiveFromDataTransformerName." etc.
Hope this essay is of some help.