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I have a Mac OS app that uses a separate swift-built binary to extend its functionality. It is non sandboxed and signed via Developer ID method. I placed the binary file in Contents/MacOS directory of the bundle. Here are the entitlements used to sign the bundle: <!DOCTYPE plist PUBLIC "-//Apple//DTD PLIST 1.0//EN" "http://www.apple.com/DTDs/PropertyList-1.0.dtd"> <plist version="1.0"> <dict> <key>com.apple.security.cs.allow-unsigned-executable-memory</key> <true/> <key>com.apple.security.cs.allow-jit</key> <true/> <key>com.apple.security.cs.allow-dyld-environment-variables</key> <true/> <key>com.apple.security.cs.disable-library-validation</key> <true/> </dict> </plist> When the application is built for arm64 (using arm64 built swift binary helper), successfully signed, notarized, and downloaded on a user's Mac, gatekeeper has no issues and throws no warnings. When the application is built for x86_64 (using the x86_64 built swift binary OR universal swift built binary helper), successfully signed, notarized, and downloaded on a user's Mac, gatekeeper throws the "macOS cannot verify that this app is free from malware" warning. So the issue seems to be the x86_64 swift built binary, but it is identical to arm64 build. I'm puzzled. Any suggestions on how to proceed?