The “Segmentation fault: 11” message indicates that the compiler crashed; you should definitely file a bug about that, ideally including a minimal project that reproduces the problem.
As to how to get your project successfully migrated, I have a few suggestions:
read the migration guide — It contains wealth of useful info.
start at the bottom and work up — If your project contains any frameworks, get those compiling with Swift 3 before you start working on your app. Likewise, in a layered app, disable compilation for the top layers of your code (views and controllers, say) and work on the lower layers first (model, networking, and so on).
process errors in groups — A lot of the time migration errors can be placed in a small number of common groups. Deal with each group at a time.
trust the fix its (but only so far :-) — Most of the time the fix its will do an excellent job of pointing you in the right direction.
for thorny stuff, ask for help — If you encounter issues where you’re not sure how to proceed, post specific details of those.
Share and Enjoy
—
Quinn “The Eskimo!”
Apple Developer Relations, Developer Technical Support, Core OS/Hardware
let myEmail = "eskimo" + "1" + "@apple.com"